Installation

To use Localise, first install it using pip:

(.venv) $ git clone https://git.fmrib.ox.ac.uk/yqzheng1/python-localise.git
(.venv) $ cd python-localise
(.venv) $ pip install .

FSL and Freesurfer Installation

Before proceeding, make sure you’ve also installed FSL and Freesurfer first, and have environment variables $FSLDIR and $FREESURFER_HOME set up correctly.