Conda Guide

This is a short guide on setting up conda for the first time.

  1. Download and install Miniconda (python version 3.9 or newer) from the package website.

  2. Create a conda environment for installing fsl-mrs. Note the name you specifiy with –name is arbitrary and does not need to relate to the package name.

conda create --name fsl_mrs_env -c conda-forge python=3.9

  1. Activate the environment.

conda activate fsl_mrs_env

  1. Optionally install JupyterLab to access notebooks. This is required to run the example Jupyter notebooks.

conda install -c conda-forge jupyterlab

5. Follow the FSL-MRS & spec2nii install instructions on the Installation page.

See the Conda documentation for more information.